PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00195.1_g00004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 150aa    MW: 16923.6 Da    PI: 6.8169
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00195.1_g00004.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.56.2e-1378137261
                              XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                              ke +  +r+ +NR++A+  R+RKk ++  Le ++ eL++ N++L +++++l +e   l++
  Rsa1.0_00195.1_g00004.1  78 KEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDELEEKISTLMNENTMLRK 137
                              778889***********************************************9987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.3E-1277141IPR004827Basic-leucine zipper domain
PfamPF001702.5E-1278137IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.39279142IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-1381139No hitNo description
Gene3DG3DSA:1.20.5.1705.2E-1783140No hitNo description
CDDcd147044.82E-1483132No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010224Biological Processresponse to UV-B
GO:0080167Biological Processresponse to karrikin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MSLQRPNENS SSSPSSPKKH KTEESEEELL MVPDMEAAGS TGVVSSSADD GANNQEIDQT  60
HNGTSNAKRP RGRTPADKEY RSLKRLLRNR VSAQQARERK KVYVSDLESR ANELQNNNDE  120
LEEKISTLMN ENTMLRKMLI NTRPKADENH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006406712.13e-85hypothetical protein EUTSA_v10021704mg
SwissprotQ8W1913e-81HYH_ARATH; Transcription factor HY5-like
TrEMBLV4LCK33e-85V4LCK3_EUTSA; Uncharacterized protein
STRINGBra001671.1-P1e-79(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM102661829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.27e-52HY5-homolog